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FreeCAD - An open-source parametric 3D modeler
R Lang - R is a free software environment for statistical computing and graphics.
SketchUp - 3D for Everyone
AMPL - A mathematical programming Library (AMPL).
Blender - Blender is the open source, cross platform suite of tools for 3D creation.
MATLAB - A high-level language and interactive environment for numerical computation, visualization, and programming