kdiff3
Beyond Compare
WinMerge
Meld
Araxis Merge
DiffMerge
P4Merge
Devart Code Compare
RJS Graph
LabPlot
SciDaVis
DataMelt
Aveloy Graph
DPlot
IGOR Pro
OriginPro
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Beyond Compare - Beyond Compare allows you to compare files and folders.
LabPlot - LabPlot is a KDE-application for interactive graphing and analysis of scientific data.
WinMerge - WinMerge is an open source differencing and merging tool for Windows.
SciDaVis - SciDAVis is a free application for Scientific Data Analysis and Visualization.
Meld - What is Meld? Meld is a visual diff and merge tool targeted at developers.
DataMelt - DataMelt (DMelt), a free mathematics and data-analysis software for scientists, engineers and students.