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Jira may be extremely sluggish and require a large amount of memory on the client side.
Asana - Asana project management is an effort to re-imagine how we work together, through modern productivity software. Fast and versatile, Asana helps individuals and groups get more done.
regexxer - regexxer is a nifty GUI search/replace tool featuring Perl-style regular expressions.
Trello - Infinitely flexible. Incredibly easy to use. Great mobile apps. It's free. Trello keeps track of everything, from the big picture to the minute details.
PowerGREP - Quickly search through large numbers of files on your PC or network using powerful text patterns to find exactly the information you want. Search and replace with plain text or regular expressions to maintain web sites, source code, reports, ...
Wrike - Wrike is a flexible, scalable, and easy-to-use collaborative work management software that helps high-performance teams organize and accomplish their work. Try it now.
dnGREP - dnGrep allows you to search across files with easy-to-read results.