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Composer
FigTreeBased on our record, Composer seems to be a lot more popular than FigTree. While we know about 152 links to Composer, we've tracked only 3 mentions of FigTree. We are tracking product recommendations and mentions on various public social media platforms and blogs. They can help you identify which product is more popular and what people think of it.
It's very confusing that they use the same name as the very well known PHP package manager, composer https://getcomposer.org/. - Source: Hacker News / 3 months ago
I'm embarrassed I never took the time to understand Composer until now. I have been preaching for a long time to start each PHP project with Composer, even when the project is not going end up on Packagist. - Source: dev.to / 3 months ago
Waaseyaa is a monorepo. The root composer.json defines 43 subpackages under packages/, each referenced as a path repository with @dev constraints. During development, this is convenient. Composer resolves everything locally, and you never think about versioning. - Source: dev.to / 5 months ago
(P)NPM is an outlier in this behavior compared to package managers of other languages. With package managers like Composer (PHP), pip (Python) and NuGet (.NET) dependencies are by default peer dependencies. That means that in those package managers it is not possible to have multiple versions of the same dependency in your application1. - Source: dev.to / 9 months ago
Download from getcomposer.org and follow installation instructions. - Source: dev.to / 10 months ago
Most published papers with phylogenies as a major result should include the tree in some form as part of the supplementary material. For just visualizing trees, I'd recommend something like FigTree, which is pretty straightforward and has a nice interface (though limited ability to actually do much with them). It should be able to read files with .tre, .nexus, or .newick extensions (the latter of which is just the... Source: over 2 years ago
Again, this is an overall about phylogeny, not knowing how your data looks like I would sugges futher reading, the programs commonly used are: PAUP, MEGA, PHYLIP, TREE-PUZZLE and MrBayes. Options are: FigTree, PRABI and BEAST. Source: over 3 years ago
Yes, because TRACER has nothing to do with the tree log file, and (almost) never records anything to do with the tree. First, locate the summary tree output file. This is produced by one of the following functions: consensusTree() mapTree(), mccTree(). Then make sure you have tree viewing software installed like figtree. Then open the summary tree file in your tree viewing software, and find the appropriate menu... Source: about 5 years ago
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