
Avogadro
Gnome Chemistry Utils
ACD/ChemSketch
ChemDoodle
BKchem
MedChem Designer
MolView
TrueChem
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Gnome Chemistry Utils - The Gnome Chemistry Utils include six chemistry related programs:
ACD/ChemSketch - ACD/ChemSketch for personal and academic use brings the power of our structure drawing package to your home computer.
ChemDoodle - Chemical drawing and publishing software for desktop, web and mobile. Affordable and used by thousands of scientists around the world. Free trial available for immediate download.
BKchem - BKChem is a free (as in free software :o) chemical drawing program.
MedChem Designer - Free chemical structure drawing program for Windows. Will also run in Linux using WINE.
MolView - Open Source online service