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TiddlyMap - An interactive concept- and mind-mapping plugin for the personal note-taking software TiddlyWiki based on the Vis.js library. It's free and open-source!
Evernote - Bring your life's work together in one digital workspace. Evernote is the place to collect inspirational ideas, write meaningful words, and move your important projects forward.
Wisdomap - Wisdomap Medicine is a study aid that helps medical students create differential diagnoses and suitable management plans from a presenting complaint and structured revision notes.
Standard Notes - A safe place for your notes, thoughts, and life's work
IOctopus - IOctopus is an online mind map service for a dive deep into the mind for the best ideas.
Joplin - Joplin is a free, open source note taking and to-do application, which can handle a large number of notes organised into notebooks. The notes are searchable, tagged and modified either from the applications directly or from your own text editor.