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Ema Personal Wiki - Ema Personal Wiki uses Markdown to freely create and manage structured notes, like a website.
DokuWiki - DokuWiki is a simple to use and highly versatile Open Source wiki software that doesn't require a database.
Pmwiki - PmWiki is a wiki-based system for collaborative creation and maintenance of websites.
Wiki.js - An open source, modern and powerful wiki app built on Node.js, Git, and Markdown.
TiddlyWiki - a non-linear personal web notebook
WikkaWiki - WikkaWiki is a flexible, standards-compliant and lightweight wiki engine written in PHP.