A relative easy way is to use gMKVExtract, drop all videos in and right click select check all subtitles, so it checks all the subs and you can see what files have subs (are checked) and what don't. Source: over 2 years ago
Extract the merged subtitles using gMKVExtractGUI and see if anything is missing. This will verify if some data got dropped during the merge process. It's possible special or invalid characters are hidden in the file and MKVToolNix is handling them differently than Plex. Source: over 2 years ago
If you want the original subtitle on the original video, you can extract them. Here's how : [ https://youtu.be/VGSC08d3oAQ ] [Link to download gMKVExtractGUI : https://sourceforge.net/projects/gmkvextractgui/ ]. Source: almost 3 years ago
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