Netbeans - NetBeans IDE 7.0. Develop desktop, mobile and web applications with Java, PHP, C/C++ and more. Runs on Windows, Linux, Mac OS X and Solaris. NetBeans IDE is open-source and free.
phpMyAdmin - phpMyAdmin is a tool written in PHP intended to handle the administration of MySQL over the Web.
IntelliJ IDEA - Capable and Ergonomic IDE for JVM
Sequel Pro - MySQL database management for Mac OS X
Eclipse - Eclipse is an open source community, whose projects are focused on building an open development platform comprised of extensible frameworks, tools and runtimes for building, deploying and managing software across the lifecycle.
DBeaver - DBeaver - Universal Database Manager and SQL Client.