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Leap - With Leap you find things based on your natural memory of that file.
DEVONthink - DEVONtechnologies develops DEVONthink, DEVONagent, and other Mac and iOS apps for document and information management and web research.
Zotero - Zotero is a free, easy-to-use tool to help you collect, organize, cite, and share research.
Elyse - The free version allows up to 30 tags.
Keep It - Write notes, keep things, and find them again
Yojimbo - Yojimbo makes keeping all the small (or even large) bits of information that pour in every day...