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Sakai - Historically, the community has aligned around a single project, the Sakai Collaboration and...
Netbeans - NetBeans IDE 7.0. Develop desktop, mobile and web applications with Java, PHP, C/C++ and more. Runs on Windows, Linux, Mac OS X and Solaris. NetBeans IDE is open-source and free.
LMS Collaborator - LMS Collaborator is a state-of-the-art learning management system designed to meet the need for corporate training, upskilling, and evaluation with flexible integration abilities.
Eclipse - Eclipse is an open source community, whose projects are focused on building an open development platform comprised of extensible frameworks, tools and runtimes for building, deploying and managing software across the lifecycle.
ILIAS - For several of my clients in the health care domain, ILIAS turned out to be an excellent choice.
IntelliJ IDEA - Capable and Ergonomic IDE for JVM