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Gephi - Gephi is an open-source software for visualizing and analyzing large networks graphs.
Dia - Dia is a GTK+ based diagram creation program for GNU/Linux, MacOS X, Unix, and Windows, and is released under the GPL license.
SocNetV - Social Network Visualizer (SocNetV) is a cross-platform, user-friendly free software application for social network analysis and...
draw.io - Online diagramming application
NodeXL - Home
yEd - yEd is a free desktop application to quickly create, import, edit, and automatically arrange diagrams. It runs on Windows, Mac OS X, and Unix/Linux.