Software Alternatives & Reviews

Tabnetviz VS Cytoscape

Compare Tabnetviz VS Cytoscape and see what are their differences

Tabnetviz logo Tabnetviz

Table-based network visualizer

Cytoscape logo Cytoscape

Cytoscape Official Web Site
  • Tabnetviz Landing page
    Landing page //
    2023-04-16
  • Cytoscape Landing page
    Landing page //
    2021-07-29

Tabnetviz

Categories
  • Diagrams
  • Flowcharts
  • Data Visualization
  • Graph Visualization
Website aszilagyi.github.io  

Cytoscape

Categories
  • Diagrams
  • Flowcharts
  • Network & Admin
  • Data Visualization
Website cytoscape.org  

Tabnetviz videos

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Cytoscape videos

Cytoscape Tutorial- Beginners Guide in Jupyter

More videos:

  • Review - MetScape App for Cytoscape: Creating and Viewing Correlation Networks
  • Review - Download a Sequence Similarity Network from the EFI, import it into Cytoscape and apply a layout

Category Popularity

0-100% (relative to Tabnetviz and Cytoscape)
Diagrams
12 12%
88% 88
Data Visualization
17 17%
83% 83
Flowcharts
14 14%
86% 86
Graph Visualization
23 23%
77% 77

User comments

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Social recommendations and mentions

Based on our record, Cytoscape seems to be more popular. It has been mentiond 11 times since March 2021. We are tracking product recommendations and mentions on various public social media platforms and blogs. They can help you identify which product is more popular and what people think of it.

Tabnetviz mentions (0)

We have not tracked any mentions of Tabnetviz yet. Tracking of Tabnetviz recommendations started around Mar 2021.

Cytoscape mentions (11)

  • A Canadian payroll dependency chart
    Doing a bit more digging, it's using cytoscape[0] which is similar to graphviz. If you search your favorite search engine with "Cytoscape Session Viewer", you'll find many websites displaying the same type of graphs (select layout: circle). FYI, circo doesn't always output a circle. I recently created https://github.com/MegaManSec/SSH-Snake/blob/main/tools/SSH-Snake-dot-circo.png. - Source: Hacker News / 3 months ago
  • Budō Lineage Tree: a community-driven database and interactive explorer
    The YAML files are then parsed, and a CYJS file produced, which is a graph model. This is used directly in the web app, but can also be opened in the Cytoscape desktop app , and imported into Neo4j if desired. I can add additional "export" steps to the automated build process, so e.g. GraphML (yEd, Gephi) or DOT files (GraphViz, mermaid, etc) can be used for whatever purpose needed. Source: 10 months ago
  • Any advice on a community detection algorithm?
    Both Cytoscape and Gephi are options that you can try on Windows; both can run some classic community detection algorithms and can be extended with plugins. Personally, I'd recommend you to use igraph, which can be run as an R or python libraries. Then, about the specific algorithm, I have no experience on amino acid communities, but I would approach the issue thinking the properties that you would like to... Source: over 1 year ago
  • Lost interactive graph (as in nodes + edges) editing tool
    Two common GUI tools for analysis and editing of graph data are Gephi and Cytoscape. An older alternative starting with a P is Pajek, but I've never used it. Source: over 1 year ago
  • Gephi – The Open Graph Viz Platform
    I've been thinking that Gephi is getting long in the tooth. Has anybody tried Cytoscape? (https://cytoscape.org/) (DNS is SERVFAILing at the moment.) I use it for a combination of "no K" clustering (general exploration) and what's referred to in threat intelligence by the term of art "pivoting". - Source: Hacker News / almost 2 years ago
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What are some alternatives?

When comparing Tabnetviz and Cytoscape, you can also consider the following products

Gephi - Gephi is an open-source software for visualizing and analyzing large networks graphs.

Socilyzer - 'An

Graphviz - Graphviz is open source graph visualization software. It has several main graph layout programs.

VOSviewer - VOSviewer is a software tool for constructing and visualizing bibliometric networks.

KeyLines - The JavaScript toolkit for graph visualization

Graphia - Graphia is a powerful open source visual analytics application developed to aid the interpretation of large and complex datasets.