Jira - The #1 software development tool used by agile teams. Jira Software is built for every member of your software team to plan, track, and release great software.
Intervals - Project driven time tracking with customizable workflows and detailed, meaningful reports.
Krosswall - Agile project management tool
TaskMail - Project Management as easy as Email
Basecamp - A simple and elegant project management system.
Rindle - Powerful workflow automation for professionals.