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Based on our record, Redash should be more popular than Cytoscape. It has been mentiond 19 times since March 2021. We are tracking product recommendations and mentions on various public social media platforms and blogs. They can help you identify which product is more popular and what people think of it.
I am looking for service or tool similiar to Metabase or Redash that allows me to add data source - for example Postgres connection, and create raw SQL queries that can be shared or exposed through API. So instead of keeping raw SQL code somewhere, my other service would call this tool e.g. http://microservice/query=1?param1=xx&page=2 and get the results from the DB. These calls are internal only and part of ETL... Source: 9 months ago
I have tried Metabase, Redash beore (both self hosted open source versions), from my experience I find Metabase a bit easy to work with. Source: 11 months ago
Regarding visualization tools, sqliteviz has proven to be the best I've found so far. Their web app runs locally but has some trackers, so I run it locally via a simple, static HTTP server. Falcon and Redash seem like overkill for my needs. Source: 11 months ago
In addition to metabase there are redash[0] and apache superset[1]. They are more or less similar to metabase with some different quirks. You can also visualize quite a bit of data in grafana[2] as well. [0] https://redash.io/ [1] https://superset.apache.org/ [2] https://github.com/grafana/grafana. - Source: Hacker News / over 1 year ago
This is typically called a "dashboard" and there is a whole industry of existing commercial products (for example https://redash.io/) that are built around doing data analysis and visualization. Source: over 1 year ago
Doing a bit more digging, it's using cytoscape[0] which is similar to graphviz. If you search your favorite search engine with "Cytoscape Session Viewer", you'll find many websites displaying the same type of graphs (select layout: circle). FYI, circo doesn't always output a circle. I recently created https://github.com/MegaManSec/SSH-Snake/blob/main/tools/SSH-Snake-dot-circo.png. - Source: Hacker News / 4 months ago
The YAML files are then parsed, and a CYJS file produced, which is a graph model. This is used directly in the web app, but can also be opened in the Cytoscape desktop app , and imported into Neo4j if desired. I can add additional "export" steps to the automated build process, so e.g. GraphML (yEd, Gephi) or DOT files (GraphViz, mermaid, etc) can be used for whatever purpose needed. Source: 12 months ago
Both Cytoscape and Gephi are options that you can try on Windows; both can run some classic community detection algorithms and can be extended with plugins. Personally, I'd recommend you to use igraph, which can be run as an R or python libraries. Then, about the specific algorithm, I have no experience on amino acid communities, but I would approach the issue thinking the properties that you would like to... Source: over 1 year ago
Two common GUI tools for analysis and editing of graph data are Gephi and Cytoscape. An older alternative starting with a P is Pajek, but I've never used it. Source: almost 2 years ago
I've been thinking that Gephi is getting long in the tooth. Has anybody tried Cytoscape? (https://cytoscape.org/) (DNS is SERVFAILing at the moment.) I use it for a combination of "no K" clustering (general exploration) and what's referred to in threat intelligence by the term of art "pivoting". - Source: Hacker News / about 2 years ago
Microsoft Power BI - BI visualization and reporting for desktop, web or mobile
Gephi - Gephi is an open-source software for visualizing and analyzing large networks graphs.
Tableau - Tableau can help anyone see and understand their data. Connect to almost any database, drag and drop to create visualizations, and share with a click.
Graphviz - Graphviz is open source graph visualization software. It has several main graph layout programs.
Metabase - Metabase is the easy, open source way for everyone in your company to ask questions and learn from...
KeyLines - The JavaScript toolkit for graph visualization