strace - Trace system calls and signals. A diagnostic, debugging and instructional userspace utility.
Autoruns - See what programs are configured to startup automatically when your system boots and you login.
ftrace - A function tracer for the Linux kernel.
Autorun Organizer - Free startup manager with delay option.
Valgrind - Valgrind is an instrumentation framework for building dynamic analysis tools.
HiBit Startup Manager - Manage the List of All Applications that are Loaded Automatically When Windows Starts Up.