JChemPaint
ChemDraw
ACD/ChemSketch
Gnome Chemistry Utils
ChemDoodle
Avogadro
BKchem
MolView
Periodica - Periodic Table
Ptable
Atomic - Periodic Table
Kalzium
Periodic Table of Elements
Periodic-table.io
Avogadro
Gnome Chemistry Utils
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I'd recommend using "JChemPaint" which is a 2D editor. It also contains lots of templates, or you can just go to a site such as pubchem to copy the SMILES representation of a molecule and then have JChempaint draw the structure by just pasting the string. Source: about 1 year ago
ChemDraw - ChemDraw - The Gold Standard for Chemical Structure Drawing and Research Publications.
Ptable - Interactive periodic table with dynamic layouts showing names, electrons, oxidation, trend visualization, orbitals, isotopes, and compound search. Full descriptions from write-up sources.
ACD/ChemSketch - ACD/ChemSketch for personal and academic use brings the power of our structure drawing package to your home computer.
Atomic - Periodic Table - Bring a Periodic Table with you anywhere you go
Gnome Chemistry Utils - The Gnome Chemistry Utils include six chemistry related programs:
Kalzium - Kalzium (German for: Calcium) is a periodic table of the elements for KDE SC 4.