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YouTrack - Free, online, easy-to-use, fully customizable issue tracking and agile project management tool your development team will love, by JetBrains. Our cloud or your server.
Jira - The #1 software development tool used by agile teams. Jira Software is built for every member of your software team to plan, track, and release great software.
Redmine - Flexible project management web application
GitLab - Create, review and deploy code together with GitLab open source git repo management software | GitLab
Trac - Trac is a project management and bug/issue tracking system. Provides an interface to Subversion and an integrated wiki.
Asana - Asana project management is an effort to re-imagine how we work together, through modern productivity software. Fast and versatile, Asana helps individuals and groups get more done.