Benchling is a modern research platform that connects the entire R&D lifecycle — from project documentation and data acquisition to sequence design, sample management, process management, and reporting. By standardizing and centralizing R&D workflows on a single platform, Benchling helps forward-thinking companies accelerate their digital lab transformation to enable better, faster decision-making.
Benchling might be a bit more popular than FigTree. We know about 3 links to it since March 2021 and only 3 links to FigTree. We are tracking product recommendations and mentions on various public social media platforms and blogs. They can help you identify which product is more popular and what people think of it.
Most published papers with phylogenies as a major result should include the tree in some form as part of the supplementary material. For just visualizing trees, I'd recommend something like FigTree, which is pretty straightforward and has a nice interface (though limited ability to actually do much with them). It should be able to read files with .tre, .nexus, or .newick extensions (the latter of which is just the... Source: 5 months ago
Again, this is an overall about phylogeny, not knowing how your data looks like I would sugges futher reading, the programs commonly used are: PAUP, MEGA, PHYLIP, TREE-PUZZLE and MrBayes. Options are: FigTree, PRABI and BEAST. Source: over 1 year ago
Yes, because TRACER has nothing to do with the tree log file, and (almost) never records anything to do with the tree. First, locate the summary tree output file. This is produced by one of the following functions: consensusTree() mapTree(), mccTree(). Then make sure you have tree viewing software installed like figtree. Then open the summary tree file in your tree viewing software, and find the appropriate menu... Source: almost 3 years ago
You can make use of genetic data from there by designing your own genetic sequences. Check out benchling.com if you're interested in that. You could make projects that are about designing different proteins, that you can then also visualise in a website, or using pymol. Source: 12 months ago
Sucrase has been extensively tested. It can successfully build The Benchling frontend code Babel React, TSLint, Apollo client, and Decaffeinate With all…. - Source: dev.to / over 2 years ago
Benchling : Powerful tool to manage,design, analyze, and share sequence data || suggested by /u/grumpy_goat and r/labrats. Source: almost 3 years ago
TreeView - Tree drawing software for Apple Macintosh and Windows.
LabWare LIMS - Electronic laboratory information management software
BioEdit - Biological sequence alignment editor
STARLIMS - Work with one partner for all your lab data management needs. We offer LIMS, SDMS, ELN solutions, as well as Cloud Services, Mobile and Advanced Analytics.
UGENE - UGENE is free open-source cross-platform bioinformatics software
SoftLab - SOFTlab is a design studio based in New York City.