wnr - Better than pomodoro, this timer app balances work and rest.
Toggl - Toggl is an online time tracking tool. It features 1-click time tracking and helps you see where your time goes. Free and paid versions are available.
Smart Sloth - Smart Sloth uses the concept of timeboxing, which is to allocate a set amount of time to each task, therefore, creating a deadline which can increase the productivity of the user.
Harvest - Simple time tracking, fast online invoicing, and powerful reporting software. Simplify employee timesheets and billing. Get started for free.
ChirpyTime - ChirpyTime: Timer / Alarm Clock / Clock app for iPhone / iPod Touch
RescueTime - Time management software that shows you how you spend your time & provides tools to help you be more productive.