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Cytoscape VS Visio

Compare Cytoscape VS Visio and see what are their differences

Cytoscape logo Cytoscape

Cytoscape Official Web Site

Visio logo Visio

Simplify and communicate complex information using data-linked diagrams.
  • Cytoscape Landing page
    Landing page //
    2021-07-29
  • Visio Landing page
    Landing page //
    2023-02-04

Cytoscape videos

Cytoscape Tutorial- Beginners Guide in Jupyter

More videos:

  • Review - MetScape App for Cytoscape: Creating and Viewing Correlation Networks
  • Review - Download a Sequence Similarity Network from the EFI, import it into Cytoscape and apply a layout

Visio videos

Microsoft Visio 2019 - Full Tutorial for Beginners [+General Overview]

More videos:

  • Review - 9 Alternatives to Microsoft Visio
  • Review - Updates to Microsoft Visio

Category Popularity

0-100% (relative to Cytoscape and Visio)
Diagrams
26 26%
74% 74
Flowcharts
25 25%
75% 75
Data Visualization
100 100%
0% 0
Wireframing
0 0%
100% 100

User comments

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Reviews

These are some of the external sources and on-site user reviews we've used to compare Cytoscape and Visio

Cytoscape Reviews

We have no reviews of Cytoscape yet.
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Visio Reviews

10 Best Visio Alternatives for Cost Effective Diagramming [2022]
If you are looking for Microsoft Visio alternatives then you are at the right place. We are not gonna lie Microsoft Visio is one of the best Visio alternatives itself. Being so powerful application with so many amazing flowchart-related features and options Microsoft Visio is one of the best flowchart tools industry can possess.
Compare The 10 Best Mind Mapping Software of 2021
Overall, Lucidchart is some of the best mind map software for those who want something easy to roll out and learn to use. It’s positioned similarly to SmartDraw as a more affordable and intuitive alternative to Microsoft Visio, and it delivers. It’s the most affordable of the three solutions, it supplies an intuitive drag-and-drop interface, and its pre-built integrations...
9 Best UML Software For Mac & PC
However, we strongly recommend taking a look at SmartDraw which is the best alternative to Microsoft Visio on Mac and is the only tool which can accurately import the latest Visio VSDX file format.
Source: machow2.com
20 Free Open Source BPM Software for Businesses in 2021
Visio is a one-stop BPM solution which simplifies and helps users to convey large or intricate information with the help of visual medium such as charts and diagrams, seamlessly. With the help of diagrams that are data-linked users can communicate important information to the other members in just a few clicks with the help of this business process modelling software.
40 Open Source, Free and Top Unified Modeling Language (UML) Tools
Visio is a one-stop diagramming solution to simplify and communicate complex information. Visio helps the user work visually and produce diagram effortlessly.Visio simplify and communicate complex information with data-linked diagrams that you can create in just a few clicks. It does simplify and communicate complex information with data-linked diagrams that create in just a...

Social recommendations and mentions

Based on our record, Cytoscape seems to be more popular. It has been mentiond 11 times since March 2021. We are tracking product recommendations and mentions on various public social media platforms and blogs. They can help you identify which product is more popular and what people think of it.

Cytoscape mentions (11)

  • A Canadian payroll dependency chart
    Doing a bit more digging, it's using cytoscape[0] which is similar to graphviz. If you search your favorite search engine with "Cytoscape Session Viewer", you'll find many websites displaying the same type of graphs (select layout: circle). FYI, circo doesn't always output a circle. I recently created https://github.com/MegaManSec/SSH-Snake/blob/main/tools/SSH-Snake-dot-circo.png. - Source: Hacker News / 4 months ago
  • Budō Lineage Tree: a community-driven database and interactive explorer
    The YAML files are then parsed, and a CYJS file produced, which is a graph model. This is used directly in the web app, but can also be opened in the Cytoscape desktop app , and imported into Neo4j if desired. I can add additional "export" steps to the automated build process, so e.g. GraphML (yEd, Gephi) or DOT files (GraphViz, mermaid, etc) can be used for whatever purpose needed. Source: 12 months ago
  • Any advice on a community detection algorithm?
    Both Cytoscape and Gephi are options that you can try on Windows; both can run some classic community detection algorithms and can be extended with plugins. Personally, I'd recommend you to use igraph, which can be run as an R or python libraries. Then, about the specific algorithm, I have no experience on amino acid communities, but I would approach the issue thinking the properties that you would like to... Source: over 1 year ago
  • Lost interactive graph (as in nodes + edges) editing tool
    Two common GUI tools for analysis and editing of graph data are Gephi and Cytoscape. An older alternative starting with a P is Pajek, but I've never used it. Source: almost 2 years ago
  • Gephi – The Open Graph Viz Platform
    I've been thinking that Gephi is getting long in the tooth. Has anybody tried Cytoscape? (https://cytoscape.org/) (DNS is SERVFAILing at the moment.) I use it for a combination of "no K" clustering (general exploration) and what's referred to in threat intelligence by the term of art "pivoting". - Source: Hacker News / about 2 years ago
View more

Visio mentions (0)

We have not tracked any mentions of Visio yet. Tracking of Visio recommendations started around Mar 2021.

What are some alternatives?

When comparing Cytoscape and Visio, you can also consider the following products

Gephi - Gephi is an open-source software for visualizing and analyzing large networks graphs.

LucidChart - LucidChart is the missing link in online productivity suites. LucidChart allows users to create, collaborate on, and publish attractive flowcharts and other diagrams from a web browser.

Graphviz - Graphviz is open source graph visualization software. It has several main graph layout programs.

draw.io - Online diagramming application

KeyLines - The JavaScript toolkit for graph visualization

PlantUML - PlantUML is an open-source tool that uses simple textual descriptions to draw UML diagrams.