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FileZilla - FileZilla is an FTP, or file transfer protocol, client. It lets individuals transfer single files or batches to a web server. For many years, FTP was the standard for website design. Read more about FileZilla.
Beyond Compare - Beyond Compare allows you to compare files and folders.
DPLOY - An FTP/SFTP deployment tool built in node.js
WinMerge - WinMerge is an open source differencing and merging tool for Windows.
Cloudu - Secure German online storage and file sync service. Apps for all major platforms.
Meld - What is Meld? Meld is a visual diff and merge tool targeted at developers.