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LabsLand - LabsLand lets students access real educational laboratories through the Internet.
Terraria - Dig, Fight, Build! The very world is at your fingertips as you fight for survival, fortune, and glory.
PhET Interactive Simulations - Founded in 2002 by Nobel Laureate Carl Wieman, the PhET Interactive Simulations project at the University of Colorado Boulder creates free interactive math and science simulations.
SimPhy - Interactive 2D & 3D Physics simulation software
myPhysicsLab - myPhysicsLab provides JavaScript classes to build real-time interactive animated physics...
Physion - Physics Simulation Sandbox